How to get centroid specific part of an image
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Ajay Goyal
el 9 de Mzo. de 2015
Comentada: Ajay Goyal
el 11 de Mzo. de 2015
I am intended to compute centroid of a part of image. I am getting centroid of all parts of the image which makes me confused of selecting the right one. my code is:
I = imread('Murine_Tibia_Crosssection.png')
Ibw = im2bw(I);
Ibw = imfill(Ibw,'holes');
Ilabel = bwlabel(Ibw);
stat = regionprops(Ilabel,'centroid');
imshow(I); hold on;
for x = 1: numel(stat)
plot(stat(x).Centroid(1),stat(x).Centroid(2),'ro');
end
please help me to get the right one.
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Respuesta aceptada
Christiaan
el 10 de Mzo. de 2015
Editada: Christiaan
el 10 de Mzo. de 2015
Dear Ajay,
If an image shows multiple centroids, there are some tricks to still determine the centroid. First you can filter the image using the function medfilt2. Then you can make the image black and white with the function im2bw. Finally you can fill holes when the size of the hole is smaller than a specific size with the function bwareaopen.
See the code below for an example:
clc;clear all;close all;
I = imread('Murine_Tibia_Crosssection.png');
figure(1)
imshow(I)
stat = regionprops(I,'centroid');
I_filtered = medfilt2(I, [12 12]);
figure(2)
imshow(I_filtered)
level = graythresh(I_filtered)
BlackWhite = im2bw(I_filtered, level);
figure(3)
imshow(BlackWhite);
original = BlackWhite;
filled = imfill(original, 'holes');
holes = filled & ~original;
bigholes = bwareaopen(holes, 500);
smallholes = holes & ~bigholes;
new = original | smallholes;
figure(4)
imshow(new);
stat = regionprops(new,'centroid');
hold on; for x = 1: numel(stat)
plot(stat(x).Centroid(1),stat(x).Centroid(2),'ro','linewidth',5);
end
hold off
Good luck! Christiaan
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Más respuestas (2)
Image Analyst
el 10 de Mzo. de 2015
My Image Segmentation Tutorial shows you how to get centroids.
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