accelerate

Prepare SimFunction for accelerated simulations

Syntax

accelerate(F)


Input Arguments

F	SimFunction object created by the createSimFunction method of a SimBiology model.

Description

accelerate(F) prepares SimFunction object F for accelerated simulations.

Note

F is automatically accelerated at the first function execution. However, manually accelerate the object if you want it accelerated in your deployment applications.

Examples

Check SimFunction Acceleration Status

Load the lotka model.

sbioloadproject lotka;

Create a SimFunction object f with c1 and c2 as input parameters to be scanned, and y1 and y2 as the output of the function with no dose.

f = createSimFunction(m1,{'Reaction1.c1', 'Reaction2.c2'},{'y1', 'y2'}, [])

f = 
SimFunction

Parameters:

          Name          Value        Type     
    ________________    _____    _____________

    {'Reaction1.c1'}      10     {'parameter'}
    {'Reaction2.c2'}    0.01     {'parameter'}

Observables: 

     Name        Type    
    ______    ___________

    {'y1'}    {'species'}
    {'y2'}    {'species'}

Dosed: None

The SimFunction object f is not set for acceleration at the time of creation. But it will be automatically accelerated when executed.

f.isAccelerated

ans = logical
   0

Define an input matrix that contains parameter values for c1 and c2.

phi = [10 0.01];

Run simulations until the stop time is 5 and plot the simulation results.

sbioplot(f(phi,5));

Confirm the SimFunction object f was accelerated during execution.

f.isAccelerated

ans = logical
   1