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Analysis of 3-D Structures of Biological Molecules

Analyze and visualize 3-D structures of proteins and other biomolecules


Molecule ViewerDisplay and manipulate 3-D molecule structure


pdbtransformApply linear transformation to 3-D structure of molecule
pdbsuperposeSuperpose 3-D structures of two proteins
pdbreadRead data from Protein Data Bank (PDB) file
pdbwriteWrite to file using Protein Data Bank (PDB) format
molviewerDisplay and manipulate 3-D molecule structure
pdbdistplotVisualize intermolecular distances in Protein Data Bank (PDB) file
ramachandranDraw Ramachandran plot for Protein Data Bank (PDB) data
evalrasmolscriptSend RasMol script commands to Molecule Viewer window


Visualizing the Three-Dimensional Structure of a Molecule

This example shows how to display, inspect and annotate the three-dimensional structure of molecules.