Cluster with 8 workers runs only one job at a time

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Stephen
Stephen el 18 de Jun. de 2014
Comentada: Stephen el 19 de Jun. de 2014
I am using a local cluster (parcluster) to run 6 jobs. When I examine my cluster, I see that it reports 8 workers. Since I'm submitting the 6 jobs simulataneously, I would expect that all six would start running right away. Instead, the jobs are only executed one at a time with the others remaining in a 'queued' state. Is there a way to run more than one job at a time, or (best case) run all jobs simultaneously?
  2 comentarios
Edric Ellis
Edric Ellis el 18 de Jun. de 2014
How are you submitting these jobs? I just tried this using the BATCH command, and saw this:
>> c = parcluster('local');
>> for idx = 1:6, batch(c, 'pause(10)'); end
>> c.Jobs
ans =
6x1 Job array:
ID Type State FinishTime Username Tasks
------------------------------------------------------------------
1 1 independent running eellis 1
2 2 independent running eellis 1
3 3 independent running eellis 1
4 4 independent running eellis 1
5 5 independent running eellis 1
6 6 independent running eellis 1
Stephen
Stephen el 18 de Jun. de 2014
The jobs are submitted as a group of 20 tasks using createTask, as follows:
myCluster = parcluster;
for i = 1:6
workerTable{i,1} = createJob(myCluster);
for j = 1:20
createTask(workerTable{i,1},@lengthyFxn,7,{inputArgs});
end
submit(workerTable{i,1});
end

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Sean de Wolski
Sean de Wolski el 18 de Jun. de 2014
The tasks are not running serially as you expect but are running in parallel and are thus using all of the resources available. This is why the next job has to wait until the previous has finished running all of its tasks.
  3 comentarios
Stephen
Stephen el 19 de Jun. de 2014
How could I increase the number of workers in the parpool? Would increasing the number of workers help the background processes to finish sooner or is that capped by system resources?

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