Paola Favaretto

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Con actividad desde 2015

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How can icreate a local database and run a local blast operation using genome sequence?
Try this: >> blastformat('Inputdb', 'E:\genome1.fas'); You do not need an output variable (check the help for reference on...

casi 8 años hace | 0

Respondida
how to import gene fasta file from NCBI using matlab 2016a
What version of Bioinformatics Toolbox are you using? I am able to download the sequence without issues. You can get the sequ...

casi 8 años hace | 0

Respondida
how to import gene fasta file from NCBI using matlab 2016a
Are you sure it is a valid accession number? When I search the NCBI databases with the id you provided, I get 0 results.

casi 8 años hace | 0

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getgenbank function not working
Luuk is correct. After the transition to https at NCBI (effective November 2016), GETGENBANK, GETGENPEPT and other functions acc...

alrededor de 8 años hace | 0

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Getgenpept and getgenbank with https change in ncbi site
After the transition to https at NCBI (effective November 2016), GETGENBANK, GETGENPEPT and other functions accessing NCBI web s...

alrededor de 8 años hace | 0

Respondida
Why doesn't getncbidata work?
After the transition to https at NCBI (effective November 2016), GETGENBANK, GETGENPEPT and other functions accessing NCBI web s...

alrededor de 8 años hace | 0

Respondida
connect to NCBI database
You can use GETGENBANK, GETGENPEPT and other similar functions from the MATLAB Bioinformatics Toolbox to query NCBI databases.

alrededor de 8 años hace | 0

Respondida
Getgenpept and getgenbank with https change in ncbi site
Please contact MathWorks Tech Support. They will be able to provide you with a patch or a suitable workaround.

más de 8 años hace | 0

Enviada


Modeling Lung Cancer Diagnosis Using Bayesian Network Inference
Pearl's message passing algorithm implementation and application to lung cancer diagnosis

más de 8 años hace | 4 descargas |

Enviada


Taxonomic Annotation of BLAST Reports
Annotate BLAST reports with taxonomic information

más de 8 años hace | 1 descarga |

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Matlab and IonTorrent?
Hi, 1) bamread requires that REFERENCE may either be a MATLAB string containing the name of the reference sequence, or a pos...

casi 9 años hace | 1

Respondida
Error using the function gethmmprof
The Bioinformatics Toolbox version you are running (R2013a) supports only HMMER2.0 and HMMER3/b. The format of the current datab...

más de 9 años hace | 1

| aceptada